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Cluster: Rep_77_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_77_c_37 Rep_77_c_37_141 154498 156147 + 4.C.1.1.4
pfam Rep_77_c_37 Rep_77_c_37_142 156382 157800 + AdoHcyase_NAD | 2-Hacid_dh_C | AdoHcyase | KARI_N
TC Rep_77_c_37 Rep_77_c_37_143 157861 160377 + 9.B.144.1.4
CAZyme Rep_77_c_37 Rep_77_c_37_144 160516 162699 - GH97
CAZyme Rep_77_c_37 Rep_77_c_37_145 163039 164400 - GH13
pfam Rep_77_c_37 Rep_77_c_37_146 164397 165548 - SusE
TC Rep_77_c_37 Rep_77_c_37_147 165624 167195 - 8.A.46.1.1
TC Rep_77_c_37 Rep_77_c_37_148 167213 170227 - 1.B.14.6.1
pfam Rep_77_c_37 Rep_77_c_37_149 170505 172130 - DUF6377
NULL(UNKNOWN) Rep_77_c_37 Rep_77_c_37_150 172386 172928 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_77_c_37 Rep_77_c_37_151 173384 174139 - 3.D.10.1.5
TC Rep_77_c_37 Rep_77_c_37_152 174174 176120 - 3.D.10.1.5
Gene ID: Rep_77_c_37_141
Type: TC
Location: 154498 - 156147 (+)
Gene ID: Rep_77_c_37_142
Type: pfam
Location: 156382 - 157800 (+)
Gene ID: Rep_77_c_37_143
Type: TC
Location: 157861 - 160377 (+)
Gene ID: Rep_77_c_37_144
Type: CAZyme
Location: 160516 - 162699 (-)
Gene ID: Rep_77_c_37_145
Type: CAZyme
Location: 163039 - 164400 (-)
Gene ID: Rep_77_c_37_146
Type: pfam
Location: 164397 - 165548 (-)
Gene ID: Rep_77_c_37_147
Type: TC
Location: 165624 - 167195 (-)
Gene ID: Rep_77_c_37_148
Type: TC
Location: 167213 - 170227 (-)
Gene ID: Rep_77_c_37_149
Type: pfam
Location: 170505 - 172130 (-)
Gene ID: Rep_77_c_37_150
Type:
Location: 172386 - 172928 (-)
Gene ID: Rep_77_c_37_151
Type: TC
Location: 173384 - 174139 (-)
Gene ID: Rep_77_c_37_152
Type: TC
Location: 174174 - 176120 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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