Cluster: Rep_77_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_77
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_77_c_2 | Rep_77_c_2_92 | 100140 | 101693 | + | 3.B.1.1.2 |
| NULL(UNKNOWN) | Rep_77_c_2 | Rep_77_c_2_93 | 101721 | 101948 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_77_c_2 | Rep_77_c_2_94 | 101975 | 102403 | + | 3.B.1.1.2 |
| STP | Rep_77_c_2 | Rep_77_c_2_95 | 102583 | 103896 | + | TPR_2 |
| CAZyme | Rep_77_c_2 | Rep_77_c_2_96 | 104091 | 105947 | + | GH13_46 |
Gene ID: Rep_77_c_2_92
Type: TC
Location: 100140 - 101693 (+)
Type: TC
Location: 100140 - 101693 (+)
Gene ID: Rep_77_c_2_93
Type:
Location: 101721 - 101948 (+)
Type:
Location: 101721 - 101948 (+)
Gene ID: Rep_77_c_2_94
Type: TC
Location: 101975 - 102403 (+)
Type: TC
Location: 101975 - 102403 (+)
Gene ID: Rep_77_c_2_95
Type: STP
Location: 102583 - 103896 (+)
Type: STP
Location: 102583 - 103896 (+)
Gene ID: Rep_77_c_2_96
Type: CAZyme
Location: 104091 - 105947 (+)
Type: CAZyme
Location: 104091 - 105947 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp007896885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.