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Cluster: Rep_77_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_77_c_25 Rep_77_c_25_138 196046 196282 - 3.D.1.6.3
pfam Rep_77_c_25 Rep_77_c_25_139 196381 197004 + Formyl_trans_N
pfam Rep_77_c_25 Rep_77_c_25_140 197024 198070 - 2-Hacid_dh | 2-Hacid_dh_C | DUF3410
CAZyme Rep_77_c_25 Rep_77_c_25_141 198159 199892 + GT83
pfam Rep_77_c_25 Rep_77_c_25_142 199906 201891 - Sulfatase
pfam Rep_77_c_25 Rep_77_c_25_143 201894 202313 - GtrA_DPMS_TM
CAZyme Rep_77_c_25 Rep_77_c_25_144 202297 203256 - GT2
CAZyme Rep_77_c_25 Rep_77_c_25_145 203253 204053 - CE4
Gene ID: Rep_77_c_25_138
Type: TC
Location: 196046 - 196282 (-)
Gene ID: Rep_77_c_25_139
Type: pfam
Location: 196381 - 197004 (+)
Gene ID: Rep_77_c_25_140
Type: pfam
Location: 197024 - 198070 (-)
Gene ID: Rep_77_c_25_141
Type: CAZyme
Location: 198159 - 199892 (+)
Gene ID: Rep_77_c_25_142
Type: pfam
Location: 199906 - 201891 (-)
Gene ID: Rep_77_c_25_143
Type: pfam
Location: 201894 - 202313 (-)
Gene ID: Rep_77_c_25_144
Type: CAZyme
Location: 202297 - 203256 (-)
Gene ID: Rep_77_c_25_145
Type: CAZyme
Location: 203253 - 204053 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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