Cluster: Rep_77_CGC25
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 7
- Substrate:
- Genome ID: Rep_77
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_77_c_25 | Rep_77_c_25_67 | 88503 | 89468 | + | GH43_31 |
| sulfatase | Rep_77_c_25 | Rep_77_c_25_68 | 89558 | 90907 | + | S1_22 |
| CAZyme | Rep_77_c_25 | Rep_77_c_25_69 | 90938 | 91930 | + | GH43_3 |
| CAZyme | Rep_77_c_25 | Rep_77_c_25_70 | 92196 | 93488 | + | GH177 |
| NULL(UNKNOWN) | Rep_77_c_25 | Rep_77_c_25_71 | 93485 | 93739 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_77_c_25 | Rep_77_c_25_72 | 93741 | 94625 | + | ApbE |
| CAZyme | Rep_77_c_25 | Rep_77_c_25_73 | 94666 | 96090 | + | GH109 |
| CAZyme | Rep_77_c_25 | Rep_77_c_25_74 | 96120 | 97223 | + | GH105 |
| sulfatase | Rep_77_c_25 | Rep_77_c_25_75 | 97252 | 98598 | + | S1_14 |
| TC | Rep_77_c_25 | Rep_77_c_25_76 | 99134 | 102394 | + | 1.B.14.6.1 |
| TC | Rep_77_c_25 | Rep_77_c_25_77 | 102413 | 104425 | + | 8.A.46.1.3 |
| CAZyme | Rep_77_c_25 | Rep_77_c_25_78 | 104628 | 105731 | + | GH105 |
| pfam | Rep_77_c_25 | Rep_77_c_25_79 | 105750 | 108542 | + | Trehalase | Glyco_hydro_63 | MGH1-like_GH |
| CAZyme | Rep_77_c_25 | Rep_77_c_25_80 | 108742 | 110775 | + | GH182 |
| pfam | Rep_77_c_25 | Rep_77_c_25_81 | 110986 | 111420 | - | YbeY |
| TC | Rep_77_c_25 | Rep_77_c_25_82 | 111454 | 112686 | - | 9.B.156.3.1 |
Gene ID: Rep_77_c_25_67
Type: CAZyme
Location: 88503 - 89468 (+)
Type: CAZyme
Location: 88503 - 89468 (+)
Gene ID: Rep_77_c_25_68
Type: sulfatase
Location: 89558 - 90907 (+)
Type: sulfatase
Location: 89558 - 90907 (+)
Gene ID: Rep_77_c_25_69
Type: CAZyme
Location: 90938 - 91930 (+)
Type: CAZyme
Location: 90938 - 91930 (+)
Gene ID: Rep_77_c_25_70
Type: CAZyme
Location: 92196 - 93488 (+)
Type: CAZyme
Location: 92196 - 93488 (+)
Gene ID: Rep_77_c_25_71
Type:
Location: 93485 - 93739 (+)
Type:
Location: 93485 - 93739 (+)
Gene ID: Rep_77_c_25_72
Type: pfam
Location: 93741 - 94625 (+)
Type: pfam
Location: 93741 - 94625 (+)
Gene ID: Rep_77_c_25_73
Type: CAZyme
Location: 94666 - 96090 (+)
Type: CAZyme
Location: 94666 - 96090 (+)
Gene ID: Rep_77_c_25_74
Type: CAZyme
Location: 96120 - 97223 (+)
Type: CAZyme
Location: 96120 - 97223 (+)
Gene ID: Rep_77_c_25_75
Type: sulfatase
Location: 97252 - 98598 (+)
Type: sulfatase
Location: 97252 - 98598 (+)
Gene ID: Rep_77_c_25_76
Type: TC
Location: 99134 - 102394 (+)
Type: TC
Location: 99134 - 102394 (+)
Gene ID: Rep_77_c_25_77
Type: TC
Location: 102413 - 104425 (+)
Type: TC
Location: 102413 - 104425 (+)
Gene ID: Rep_77_c_25_78
Type: CAZyme
Location: 104628 - 105731 (+)
Type: CAZyme
Location: 104628 - 105731 (+)
Gene ID: Rep_77_c_25_79
Type: pfam
Location: 105750 - 108542 (+)
Type: pfam
Location: 105750 - 108542 (+)
Gene ID: Rep_77_c_25_80
Type: CAZyme
Location: 108742 - 110775 (+)
Type: CAZyme
Location: 108742 - 110775 (+)
Gene ID: Rep_77_c_25_81
Type: pfam
Location: 110986 - 111420 (-)
Type: pfam
Location: 110986 - 111420 (-)
Gene ID: Rep_77_c_25_82
Type: TC
Location: 111454 - 112686 (-)
Type: TC
Location: 111454 - 112686 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp007896885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.