Cluster: Rep_77_CGC19
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 7
- Substrate:
- Genome ID: Rep_77
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_77_c_18 | Rep_77_c_18_63 | 98922 | 99731 | + | 2.A.64.3.2 |
| pfam | Rep_77_c_18 | Rep_77_c_18_64 | 99715 | 100923 | + | NAPRTase | NAPRTase_N |
| pfam | Rep_77_c_18 | Rep_77_c_18_65 | 101007 | 104549 | + | AAA_11 | AAA_11 | AAA_12 | AAA_19 |
| TC | Rep_77_c_18 | Rep_77_c_18_66 | 104888 | 106264 | + | 2.A.1.14.41 |
| CAZyme | Rep_77_c_18 | Rep_77_c_18_67 | 106457 | 107674 | + | GH105 |
| CAZyme | Rep_77_c_18 | Rep_77_c_18_68 | 107677 | 108642 | + | CE8 |
| pfam | Rep_77_c_18 | Rep_77_c_18_69 | 108698 | 109045 | - | Cupin_2 | Cupin_7 |
| CAZyme | Rep_77_c_18 | Rep_77_c_18_70 | 109180 | 110946 | + | CE12 | CE8 |
| CAZyme | Rep_77_c_18 | Rep_77_c_18_71 | 110977 | 112134 | - | CE19 |
| TF | Rep_77_c_18 | Rep_77_c_18_72 | 112221 | 116669 | + | HTH_AraC |
| CAZyme | Rep_77_c_18 | Rep_77_c_18_73 | 117031 | 119586 | - | GH3 |
| TC | Rep_77_c_18 | Rep_77_c_18_74 | 119693 | 120955 | - | 2.A.23.1.2 |
| pfam | Rep_77_c_18 | Rep_77_c_18_75 | 121146 | 122681 | - | DUF4957 | DUF5123 |
| pfam | Rep_77_c_18 | Rep_77_c_18_76 | 122693 | 124462 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_77_c_18 | Rep_77_c_18_77 | 124475 | 127663 | - | 1.B.14.6.1 |
| pfam | Rep_77_c_18 | Rep_77_c_18_78 | 128201 | 128854 | - | Hydrolase | Hydrolase_like | HAD_2 |
| CAZyme | Rep_77_c_18 | Rep_77_c_18_79 | 128972 | 130648 | - | CBM91 | GH43_10 |
| pfam | Rep_77_c_18 | Rep_77_c_18_80 | 130697 | 131914 | - | DUF4861 |
| CAZyme | Rep_77_c_18 | Rep_77_c_18_81 | 132049 | 133653 | - | GH28 |
Gene ID: Rep_77_c_18_63
Type: TC
Location: 98922 - 99731 (+)
Type: TC
Location: 98922 - 99731 (+)
Gene ID: Rep_77_c_18_64
Type: pfam
Location: 99715 - 100923 (+)
Type: pfam
Location: 99715 - 100923 (+)
Gene ID: Rep_77_c_18_65
Type: pfam
Location: 101007 - 104549 (+)
Type: pfam
Location: 101007 - 104549 (+)
Gene ID: Rep_77_c_18_66
Type: TC
Location: 104888 - 106264 (+)
Type: TC
Location: 104888 - 106264 (+)
Gene ID: Rep_77_c_18_67
Type: CAZyme
Location: 106457 - 107674 (+)
Type: CAZyme
Location: 106457 - 107674 (+)
Gene ID: Rep_77_c_18_68
Type: CAZyme
Location: 107677 - 108642 (+)
Type: CAZyme
Location: 107677 - 108642 (+)
Gene ID: Rep_77_c_18_69
Type: pfam
Location: 108698 - 109045 (-)
Type: pfam
Location: 108698 - 109045 (-)
Gene ID: Rep_77_c_18_70
Type: CAZyme
Location: 109180 - 110946 (+)
Type: CAZyme
Location: 109180 - 110946 (+)
Gene ID: Rep_77_c_18_71
Type: CAZyme
Location: 110977 - 112134 (-)
Type: CAZyme
Location: 110977 - 112134 (-)
Gene ID: Rep_77_c_18_72
Type: TF
Location: 112221 - 116669 (+)
Type: TF
Location: 112221 - 116669 (+)
Gene ID: Rep_77_c_18_73
Type: CAZyme
Location: 117031 - 119586 (-)
Type: CAZyme
Location: 117031 - 119586 (-)
Gene ID: Rep_77_c_18_74
Type: TC
Location: 119693 - 120955 (-)
Type: TC
Location: 119693 - 120955 (-)
Gene ID: Rep_77_c_18_75
Type: pfam
Location: 121146 - 122681 (-)
Type: pfam
Location: 121146 - 122681 (-)
Gene ID: Rep_77_c_18_76
Type: pfam
Location: 122693 - 124462 (-)
Type: pfam
Location: 122693 - 124462 (-)
Gene ID: Rep_77_c_18_77
Type: TC
Location: 124475 - 127663 (-)
Type: TC
Location: 124475 - 127663 (-)
Gene ID: Rep_77_c_18_78
Type: pfam
Location: 128201 - 128854 (-)
Type: pfam
Location: 128201 - 128854 (-)
Gene ID: Rep_77_c_18_79
Type: CAZyme
Location: 128972 - 130648 (-)
Type: CAZyme
Location: 128972 - 130648 (-)
Gene ID: Rep_77_c_18_80
Type: pfam
Location: 130697 - 131914 (-)
Type: pfam
Location: 130697 - 131914 (-)
Gene ID: Rep_77_c_18_81
Type: CAZyme
Location: 132049 - 133653 (-)
Type: CAZyme
Location: 132049 - 133653 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp007896885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.