Cluster: Rep_777_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_777
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_777_c_0 | Rep_777_c_0_1233 | 1243627 | 1244352 | - | 3.A.1.132.4 |
| TC | Rep_777_c_0 | Rep_777_c_0_1234 | 1244333 | 1245073 | - | 3.A.1.132.4 |
| TC | Rep_777_c_0 | Rep_777_c_0_1235 | 1245246 | 1245731 | + | 3.A.1.27.3 |
| pfam | Rep_777_c_0 | Rep_777_c_0_1236 | 1245770 | 1246231 | + | MlaD |
| pfam | Rep_777_c_0 | Rep_777_c_0_1237 | 1246212 | 1247231 | + | DUF2155 |
| CAZyme | Rep_777_c_0 | Rep_777_c_0_1238 | 1247256 | 1248212 | + | GT2 |
Gene ID: Rep_777_c_0_1233
Type: TC
Location: 1243627 - 1244352 (-)
Type: TC
Location: 1243627 - 1244352 (-)
Gene ID: Rep_777_c_0_1234
Type: TC
Location: 1244333 - 1245073 (-)
Type: TC
Location: 1244333 - 1245073 (-)
Gene ID: Rep_777_c_0_1235
Type: TC
Location: 1245246 - 1245731 (+)
Type: TC
Location: 1245246 - 1245731 (+)
Gene ID: Rep_777_c_0_1236
Type: pfam
Location: 1245770 - 1246231 (+)
Type: pfam
Location: 1245770 - 1246231 (+)
Gene ID: Rep_777_c_0_1237
Type: pfam
Location: 1246212 - 1247231 (+)
Type: pfam
Location: 1246212 - 1247231 (+)
Gene ID: Rep_777_c_0_1238
Type: CAZyme
Location: 1247256 - 1248212 (+)
Type: CAZyme
Location: 1247256 - 1248212 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
HGM16780
Species
HGM16780 sp900538765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.