Cluster: Rep_777_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_777
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_777_c_0 | Rep_777_c_0_1103 | 1112545 | 1113528 | - | GT2 |
| CAZyme | Rep_777_c_0 | Rep_777_c_0_1104 | 1113687 | 1114667 | - | GT2 |
| CAZyme | Rep_777_c_0 | Rep_777_c_0_1105 | 1114839 | 1115819 | - | GT2 |
| NULL(UNKNOWN) | Rep_777_c_0 | Rep_777_c_0_1106 | 1115889 | 1116338 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_777_c_0 | Rep_777_c_0_1107 | 1116342 | 1117499 | - | 9.B.8.2.2 |
Gene ID: Rep_777_c_0_1103
Type: CAZyme
Location: 1112545 - 1113528 (-)
Type: CAZyme
Location: 1112545 - 1113528 (-)
Gene ID: Rep_777_c_0_1104
Type: CAZyme
Location: 1113687 - 1114667 (-)
Type: CAZyme
Location: 1113687 - 1114667 (-)
Gene ID: Rep_777_c_0_1105
Type: CAZyme
Location: 1114839 - 1115819 (-)
Type: CAZyme
Location: 1114839 - 1115819 (-)
Gene ID: Rep_777_c_0_1106
Type:
Location: 1115889 - 1116338 (-)
Type:
Location: 1115889 - 1116338 (-)
Gene ID: Rep_777_c_0_1107
Type: TC
Location: 1116342 - 1117499 (-)
Type: TC
Location: 1116342 - 1117499 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
HGM16780
Species
HGM16780 sp900538765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.