Cluster: Rep_777_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_777
- CGC Family ID: CGCFAM_10358
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_777_c_0 | Rep_777_c_0_1043 | 1065478 | 1066455 | + | GT2 |
| pfam | Rep_777_c_0 | Rep_777_c_0_1044 | 1066788 | 1067591 | - | Ion_trans | Ion_trans_2 |
| TC | Rep_777_c_0 | Rep_777_c_0_1045 | 1067597 | 1068778 | - | 2.A.36.6.4 |
Gene ID: Rep_777_c_0_1043
Type: CAZyme
Location: 1065478 - 1066455 (+)
Type: CAZyme
Location: 1065478 - 1066455 (+)
Gene ID: Rep_777_c_0_1044
Type: pfam
Location: 1066788 - 1067591 (-)
Type: pfam
Location: 1066788 - 1067591 (-)
Gene ID: Rep_777_c_0_1045
Type: TC
Location: 1067597 - 1068778 (-)
Type: TC
Location: 1067597 - 1068778 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
HGM16780
Species
HGM16780 sp900538765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.