Cluster: Rep_777_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_777
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_777_c_0 | Rep_777_c_0_133 | 150422 | 151729 | - | 9.B.174.1.1 |
| STP | Rep_777_c_0 | Rep_777_c_0_134 | 151748 | 152986 | - | Peptidase_M23 |
| pfam | Rep_777_c_0 | Rep_777_c_0_135 | 152986 | 154524 | - | Phosphodiest | Metalloenzyme | iPGM_N |
| CAZyme | Rep_777_c_0 | Rep_777_c_0_136 | 154609 | 156405 | - | GT51 |
Gene ID: Rep_777_c_0_133
Type: TC
Location: 150422 - 151729 (-)
Type: TC
Location: 150422 - 151729 (-)
Gene ID: Rep_777_c_0_134
Type: STP
Location: 151748 - 152986 (-)
Type: STP
Location: 151748 - 152986 (-)
Gene ID: Rep_777_c_0_135
Type: pfam
Location: 152986 - 154524 (-)
Type: pfam
Location: 152986 - 154524 (-)
Gene ID: Rep_777_c_0_136
Type: CAZyme
Location: 154609 - 156405 (-)
Type: CAZyme
Location: 154609 - 156405 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
HGM16780
Species
HGM16780 sp900538765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.