Cluster: Rep_775_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_775
- CGC Family ID: CGCFAM_09128
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_775_c_45 | Rep_775_c_45_19 | 15966 | 16712 | - | 1.A.1.14.6 |
| peptidase | Rep_775_c_45 | Rep_775_c_45_20 | 16750 | 17430 | - | A24.UPA |
| NULL(UNKNOWN) | Rep_775_c_45 | Rep_775_c_45_21 | 17614 | 17796 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_775_c_45 | Rep_775_c_45_22 | 18377 | 19228 | + | CE11 |
| TC | Rep_775_c_45 | Rep_775_c_45_23 | 19239 | 19985 | + | 1.B.33.1.4 |
Gene ID: Rep_775_c_45_19
Type: TC
Location: 15966 - 16712 (-)
Type: TC
Location: 15966 - 16712 (-)
Gene ID: Rep_775_c_45_20
Type: peptidase
Location: 16750 - 17430 (-)
Type: peptidase
Location: 16750 - 17430 (-)
Gene ID: Rep_775_c_45_21
Type:
Location: 17614 - 17796 (+)
Type:
Location: 17614 - 17796 (+)
Gene ID: Rep_775_c_45_22
Type: CAZyme
Location: 18377 - 19228 (+)
Type: CAZyme
Location: 18377 - 19228 (+)
Gene ID: Rep_775_c_45_23
Type: TC
Location: 19239 - 19985 (+)
Type: TC
Location: 19239 - 19985 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
MGBC133411
Species
MGBC133411 sp902495305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.