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Cluster: Rep_775_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_775_c_43 Rep_775_c_43_2 879 1814 + GT2
NULL(UNKNOWN) Rep_775_c_43 Rep_775_c_43_3 1821 2489 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_775_c_43 Rep_775_c_43_4 2486 3604 + GT4
CAZyme Rep_775_c_43 Rep_775_c_43_5 3684 4568 + GT92
CAZyme Rep_775_c_43 Rep_775_c_43_6 4637 5605 - GT2
CAZyme Rep_775_c_43 Rep_775_c_43_7 5598 6782 - GT4
sulfatase Rep_775_c_43 Rep_775_c_43_8 6930 7733 - S1_9
CAZyme Rep_775_c_43 Rep_775_c_43_9 7735 8901 - CE9
pfam Rep_775_c_43 Rep_775_c_43_10 9059 10717 + tRNA-synt_1c | Anticodon_2
TC Rep_775_c_43 Rep_775_c_43_11 10817 12166 + 2.A.45.2.2
Gene ID: Rep_775_c_43_2
Type: CAZyme
Location: 879 - 1814 (+)
Gene ID: Rep_775_c_43_3
Type:
Location: 1821 - 2489 (+)
Gene ID: Rep_775_c_43_4
Type: CAZyme
Location: 2486 - 3604 (+)
Gene ID: Rep_775_c_43_5
Type: CAZyme
Location: 3684 - 4568 (+)
Gene ID: Rep_775_c_43_6
Type: CAZyme
Location: 4637 - 5605 (-)
Gene ID: Rep_775_c_43_7
Type: CAZyme
Location: 5598 - 6782 (-)
Gene ID: Rep_775_c_43_8
Type: sulfatase
Location: 6930 - 7733 (-)
Gene ID: Rep_775_c_43_9
Type: CAZyme
Location: 7735 - 8901 (-)
Gene ID: Rep_775_c_43_10
Type: pfam
Location: 9059 - 10717 (+)
Gene ID: Rep_775_c_43_11
Type: TC
Location: 10817 - 12166 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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