Cluster: Rep_775_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_775
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_775_c_36 | Rep_775_c_36_10 | 7964 | 9730 | + | GH23 |
| NULL(UNKNOWN) | Rep_775_c_36 | Rep_775_c_36_11 | 9829 | 10377 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_775_c_36 | Rep_775_c_36_12 | 10392 | 11048 | - | 1.A.30.1.4 |
| TC | Rep_775_c_36 | Rep_775_c_36_13 | 11062 | 11871 | - | 1.A.30.1.4 |
Gene ID: Rep_775_c_36_10
Type: CAZyme
Location: 7964 - 9730 (+)
Type: CAZyme
Location: 7964 - 9730 (+)
Gene ID: Rep_775_c_36_11
Type:
Location: 9829 - 10377 (-)
Type:
Location: 9829 - 10377 (-)
Gene ID: Rep_775_c_36_12
Type: TC
Location: 10392 - 11048 (-)
Type: TC
Location: 10392 - 11048 (-)
Gene ID: Rep_775_c_36_13
Type: TC
Location: 11062 - 11871 (-)
Type: TC
Location: 11062 - 11871 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
MGBC133411
Species
MGBC133411 sp902495305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.