Cluster: Rep_775_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_775
- CGC Family ID: CGCFAM_00852
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_775_c_144 | Rep_775_c_144_3 | 1736 | 2419 | - | 1.C.82.1.1 |
| pfam | Rep_775_c_144 | Rep_775_c_144_4 | 2424 | 2861 | - | Ribosomal_L11 | Ribosomal_L11_N |
| CAZyme | Rep_775_c_144 | Rep_775_c_144_5 | 3108 | 4715 | - | GH13_23 |
Gene ID: Rep_775_c_144_3
Type: TC
Location: 1736 - 2419 (-)
Type: TC
Location: 1736 - 2419 (-)
Gene ID: Rep_775_c_144_4
Type: pfam
Location: 2424 - 2861 (-)
Type: pfam
Location: 2424 - 2861 (-)
Gene ID: Rep_775_c_144_5
Type: CAZyme
Location: 3108 - 4715 (-)
Type: CAZyme
Location: 3108 - 4715 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
MGBC133411
Species
MGBC133411 sp902495305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.