Cluster: Rep_772_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_772
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_772_c_123 | Rep_772_c_123_11 | 8473 | 10242 | + | 3.A.1.106.1 |
| pfam | Rep_772_c_123 | Rep_772_c_123_12 | 10232 | 10801 | - | Smr |
| NULL(UNKNOWN) | Rep_772_c_123 | Rep_772_c_123_13 | 10788 | 11276 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_772_c_123 | Rep_772_c_123_14 | 11276 | 12421 | - | GH102 |
Gene ID: Rep_772_c_123_11
Type: TC
Location: 8473 - 10242 (+)
Type: TC
Location: 8473 - 10242 (+)
Gene ID: Rep_772_c_123_12
Type: pfam
Location: 10232 - 10801 (-)
Type: pfam
Location: 10232 - 10801 (-)
Gene ID: Rep_772_c_123_13
Type:
Location: 10788 - 11276 (-)
Type:
Location: 10788 - 11276 (-)
Gene ID: Rep_772_c_123_14
Type: CAZyme
Location: 11276 - 12421 (-)
Type: CAZyme
Location: 11276 - 12421 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp018362935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.