Cluster: Rep_772_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_772
- CGC Family ID: CGCFAM_03720
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_772_c_95 | Rep_772_c_95_2 | 555 | 2690 | - | GH77 |
| CAZyme | Rep_772_c_95 | Rep_772_c_95_3 | 2707 | 4782 | - | GH13_11 |
| CAZyme | Rep_772_c_95 | Rep_772_c_95_4 | 4794 | 6986 | - | CBM48 | GH13_9 |
| pfam | Rep_772_c_95 | Rep_772_c_95_5 | 7197 | 7451 | + | DUF2934 |
| pfam | Rep_772_c_95 | Rep_772_c_95_6 | 7503 | 8759 | - | Ubie_methyltran | MTS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | Rep_772_c_95 | Rep_772_c_95_7 | 8833 | 9660 | + | 2.A.66.1.46 |
Gene ID: Rep_772_c_95_2
Type: CAZyme
Location: 555 - 2690 (-)
Type: CAZyme
Location: 555 - 2690 (-)
Gene ID: Rep_772_c_95_3
Type: CAZyme
Location: 2707 - 4782 (-)
Type: CAZyme
Location: 2707 - 4782 (-)
Gene ID: Rep_772_c_95_4
Type: CAZyme
Location: 4794 - 6986 (-)
Type: CAZyme
Location: 4794 - 6986 (-)
Gene ID: Rep_772_c_95_5
Type: pfam
Location: 7197 - 7451 (+)
Type: pfam
Location: 7197 - 7451 (+)
Gene ID: Rep_772_c_95_6
Type: pfam
Location: 7503 - 8759 (-)
Type: pfam
Location: 7503 - 8759 (-)
Gene ID: Rep_772_c_95_7
Type: TC
Location: 8833 - 9660 (+)
Type: TC
Location: 8833 - 9660 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp018362935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.