Cluster: Rep_772_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_772
- CGC Family ID: CGCFAM_06015
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_772_c_77 | Rep_772_c_77_2 | 368 | 1738 | - | 1.B.17.1.4 |
| CAZyme | Rep_772_c_77 | Rep_772_c_77_3 | 1933 | 4392 | + | GT35 |
| NULL(UNKNOWN) | Rep_772_c_77 | Rep_772_c_77_4 | 4532 | 6811 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_772_c_77 | Rep_772_c_77_5 | 6948 | 8243 | - | 2.A.1.26.1 |
Gene ID: Rep_772_c_77_2
Type: TC
Location: 368 - 1738 (-)
Type: TC
Location: 368 - 1738 (-)
Gene ID: Rep_772_c_77_3
Type: CAZyme
Location: 1933 - 4392 (+)
Type: CAZyme
Location: 1933 - 4392 (+)
Gene ID: Rep_772_c_77_4
Type:
Location: 4532 - 6811 (-)
Type:
Location: 4532 - 6811 (-)
Gene ID: Rep_772_c_77_5
Type: TC
Location: 6948 - 8243 (-)
Type: TC
Location: 6948 - 8243 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp018362935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.