Cluster: Rep_772_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_772
- CGC Family ID: CGCFAM_00344
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_772_c_17 | Rep_772_c_17_9 | 6475 | 7398 | - | 2.A.109.1.7 |
| CAZyme | Rep_772_c_17 | Rep_772_c_17_10 | 7605 | 8459 | - | GT2 |
| NULL(UNKNOWN) | Rep_772_c_17 | Rep_772_c_17_11 | 8470 | 9411 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_772_c_17 | Rep_772_c_17_12 | 9433 | 11196 | - | 3.A.1.106.2 |
Gene ID: Rep_772_c_17_9
Type: TC
Location: 6475 - 7398 (-)
Type: TC
Location: 6475 - 7398 (-)
Gene ID: Rep_772_c_17_10
Type: CAZyme
Location: 7605 - 8459 (-)
Type: CAZyme
Location: 7605 - 8459 (-)
Gene ID: Rep_772_c_17_11
Type:
Location: 8470 - 9411 (-)
Type:
Location: 8470 - 9411 (-)
Gene ID: Rep_772_c_17_12
Type: TC
Location: 9433 - 11196 (-)
Type: TC
Location: 9433 - 11196 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp018362935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.