Cluster: Rep_772_CGC1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_772
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_772_c_1 | Rep_772_c_1_4 | 2372 | 4231 | - | 8.A.21.2.4 |
| pfam | Rep_772_c_1 | Rep_772_c_1_5 | 4282 | 5112 | - | adh_short | adh_short_C2 |
| TC | Rep_772_c_1 | Rep_772_c_1_6 | 5239 | 6180 | + | 9.B.126.2.1 |
| STP | Rep_772_c_1 | Rep_772_c_1_7 | 6224 | 7252 | + | ATPase_2 |
| CAZyme | Rep_772_c_1 | Rep_772_c_1_8 | 7502 | 8620 | + | GT4 |
| NULL(UNKNOWN) | Rep_772_c_1 | Rep_772_c_1_9 | 8667 | 9764 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | Rep_772_c_1 | Rep_772_c_1_10 | 9997 | 10998 | + | PfkB |
| TC | Rep_772_c_1 | Rep_772_c_1_11 | 11059 | 12315 | - | 1.A.33.1.2 |
Gene ID: Rep_772_c_1_4
Type: TC
Location: 2372 - 4231 (-)
Type: TC
Location: 2372 - 4231 (-)
Gene ID: Rep_772_c_1_5
Type: pfam
Location: 4282 - 5112 (-)
Type: pfam
Location: 4282 - 5112 (-)
Gene ID: Rep_772_c_1_6
Type: TC
Location: 5239 - 6180 (+)
Type: TC
Location: 5239 - 6180 (+)
Gene ID: Rep_772_c_1_7
Type: STP
Location: 6224 - 7252 (+)
Type: STP
Location: 6224 - 7252 (+)
Gene ID: Rep_772_c_1_8
Type: CAZyme
Location: 7502 - 8620 (+)
Type: CAZyme
Location: 7502 - 8620 (+)
Gene ID: Rep_772_c_1_9
Type:
Location: 8667 - 9764 (-)
Type:
Location: 8667 - 9764 (-)
Gene ID: Rep_772_c_1_10
Type: STP
Location: 9997 - 10998 (+)
Type: STP
Location: 9997 - 10998 (+)
Gene ID: Rep_772_c_1_11
Type: TC
Location: 11059 - 12315 (-)
Type: TC
Location: 11059 - 12315 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp018362935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.