Cluster: Rep_771_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_771
- CGC Family ID: CGCFAM_02692
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_771_c_238 | Rep_771_c_238_4 | 1533 | 2948 | + | 4.C.1.1.16 |
| pfam | Rep_771_c_238 | Rep_771_c_238_5 | 2932 | 3603 | + | Acetyltransf_1 | Acetyltransf_10 |
| CAZyme | Rep_771_c_238 | Rep_771_c_238_6 | 3596 | 4591 | + | GT2 |
Gene ID: Rep_771_c_238_4
Type: TC
Location: 1533 - 2948 (+)
Type: TC
Location: 1533 - 2948 (+)
Gene ID: Rep_771_c_238_5
Type: pfam
Location: 2932 - 3603 (+)
Type: pfam
Location: 2932 - 3603 (+)
Gene ID: Rep_771_c_238_6
Type: CAZyme
Location: 3596 - 4591 (+)
Type: CAZyme
Location: 3596 - 4591 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp017480995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.