Cluster: Rep_771_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_771
- CGC Family ID: CGCFAM_02651
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_771_c_121 | Rep_771_c_121_1 | 2 | 1192 | + | GH13_11 |
| CAZyme | Rep_771_c_121 | Rep_771_c_121_2 | 1208 | 3343 | + | GH77 |
| pfam | Rep_771_c_121 | Rep_771_c_121_3 | 3343 | 3981 | + | Hydrolase | HAD_2 |
| TC | Rep_771_c_121 | Rep_771_c_121_4 | 4104 | 5264 | + | 2.A.6.2.47 |
| TC | Rep_771_c_121 | Rep_771_c_121_5 | 5268 | 8369 | + | 2.A.6.2.15 |
Gene ID: Rep_771_c_121_1
Type: CAZyme
Location: 2 - 1192 (+)
Type: CAZyme
Location: 2 - 1192 (+)
Gene ID: Rep_771_c_121_2
Type: CAZyme
Location: 1208 - 3343 (+)
Type: CAZyme
Location: 1208 - 3343 (+)
Gene ID: Rep_771_c_121_3
Type: pfam
Location: 3343 - 3981 (+)
Type: pfam
Location: 3343 - 3981 (+)
Gene ID: Rep_771_c_121_4
Type: TC
Location: 4104 - 5264 (+)
Type: TC
Location: 4104 - 5264 (+)
Gene ID: Rep_771_c_121_5
Type: TC
Location: 5268 - 8369 (+)
Type: TC
Location: 5268 - 8369 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp017480995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.