Cluster: Rep_771_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_771
- CGC Family ID: CGCFAM_05380
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_771_c_88 | Rep_771_c_88_2 | 247 | 1662 | + | 1.A.34.1.3 |
| NULL(UNKNOWN) | Rep_771_c_88 | Rep_771_c_88_3 | 1759 | 1872 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_771_c_88 | Rep_771_c_88_4 | 2054 | 2530 | - | GH24 |
Gene ID: Rep_771_c_88_2
Type: TC
Location: 247 - 1662 (+)
Type: TC
Location: 247 - 1662 (+)
Gene ID: Rep_771_c_88_3
Type:
Location: 1759 - 1872 (-)
Type:
Location: 1759 - 1872 (-)
Gene ID: Rep_771_c_88_4
Type: CAZyme
Location: 2054 - 2530 (-)
Type: CAZyme
Location: 2054 - 2530 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp017480995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.