Cluster: Rep_771_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_771
- CGC Family ID: CGCFAM_01354
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_771_c_73 | Rep_771_c_73_4 | 2682 | 4445 | + | 3.A.1.106.2 |
| NULL(UNKNOWN) | Rep_771_c_73 | Rep_771_c_73_5 | 4463 | 5404 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_771_c_73 | Rep_771_c_73_6 | 5417 | 6271 | + | GT2 |
| pfam | Rep_771_c_73 | Rep_771_c_73_7 | 6289 | 6951 | + | Hydrolase | HAD_2 |
| TC | Rep_771_c_73 | Rep_771_c_73_8 | 7009 | 7932 | + | 2.A.109.1.7 |
Gene ID: Rep_771_c_73_4
Type: TC
Location: 2682 - 4445 (+)
Type: TC
Location: 2682 - 4445 (+)
Gene ID: Rep_771_c_73_5
Type:
Location: 4463 - 5404 (+)
Type:
Location: 4463 - 5404 (+)
Gene ID: Rep_771_c_73_6
Type: CAZyme
Location: 5417 - 6271 (+)
Type: CAZyme
Location: 5417 - 6271 (+)
Gene ID: Rep_771_c_73_7
Type: pfam
Location: 6289 - 6951 (+)
Type: pfam
Location: 6289 - 6951 (+)
Gene ID: Rep_771_c_73_8
Type: TC
Location: 7009 - 7932 (+)
Type: TC
Location: 7009 - 7932 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp017480995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.