Cluster: Rep_770_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_770
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_770_c_112 | Rep_770_c_112_20 | 17647 | 19485 | + | GT51 |
| pfam | Rep_770_c_112 | Rep_770_c_112_21 | 19608 | 21137 | + | Metalloenzyme | iPGM_N |
| STP | Rep_770_c_112 | Rep_770_c_112_22 | 21144 | 22394 | + | Peptidase_M23 |
| TC | Rep_770_c_112 | Rep_770_c_112_23 | 22419 | 23711 | + | 9.B.174.1.1 |
Gene ID: Rep_770_c_112_20
Type: CAZyme
Location: 17647 - 19485 (+)
Type: CAZyme
Location: 17647 - 19485 (+)
Gene ID: Rep_770_c_112_21
Type: pfam
Location: 19608 - 21137 (+)
Type: pfam
Location: 19608 - 21137 (+)
Gene ID: Rep_770_c_112_22
Type: STP
Location: 21144 - 22394 (+)
Type: STP
Location: 21144 - 22394 (+)
Gene ID: Rep_770_c_112_23
Type: TC
Location: 22419 - 23711 (+)
Type: TC
Location: 22419 - 23711 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.