Cluster: Rep_770_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_770
- CGC Family ID: CGCFAM_00407
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_770_c_60 | Rep_770_c_60_8 | 5910 | 7031 | - | GT28 |
| TC | Rep_770_c_60 | Rep_770_c_60_9 | 7021 | 8151 | - | 2.A.103.1.1 |
| TC | Rep_770_c_60 | Rep_770_c_60_10 | 8163 | 9239 | - | 9.B.146.1.6 |
| NULL(UNKNOWN) | Rep_770_c_60 | Rep_770_c_60_11 | 9371 | 9616 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_770_c_60 | Rep_770_c_60_12 | 10015 | 11073 | - | 2.A.86.1.5 |
Gene ID: Rep_770_c_60_8
Type: CAZyme
Location: 5910 - 7031 (-)
Type: CAZyme
Location: 5910 - 7031 (-)
Gene ID: Rep_770_c_60_9
Type: TC
Location: 7021 - 8151 (-)
Type: TC
Location: 7021 - 8151 (-)
Gene ID: Rep_770_c_60_10
Type: TC
Location: 8163 - 9239 (-)
Type: TC
Location: 8163 - 9239 (-)
Gene ID: Rep_770_c_60_11
Type:
Location: 9371 - 9616 (-)
Type:
Location: 9371 - 9616 (-)
Gene ID: Rep_770_c_60_12
Type: TC
Location: 10015 - 11073 (-)
Type: TC
Location: 10015 - 11073 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.