Cluster: Rep_770_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_770
- CGC Family ID: CGCFAM_02650
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_770_c_35 | Rep_770_c_35_4 | 2215 | 3369 | - | CE9 |
| pfam | Rep_770_c_35 | Rep_770_c_35_5 | 3434 | 3898 | - | PMSR |
| TC | Rep_770_c_35 | Rep_770_c_35_6 | 4086 | 5405 | + | 2.A.45.2.2 |
| TC | Rep_770_c_35 | Rep_770_c_35_7 | 5437 | 6339 | - | 2.A.109.1.2 |
| TC | Rep_770_c_35 | Rep_770_c_35_8 | 6458 | 7135 | - | 1.A.30.1.4 |
| TC | Rep_770_c_35 | Rep_770_c_35_9 | 7147 | 7938 | - | 1.A.30.1.3 |
Gene ID: Rep_770_c_35_4
Type: CAZyme
Location: 2215 - 3369 (-)
Type: CAZyme
Location: 2215 - 3369 (-)
Gene ID: Rep_770_c_35_5
Type: pfam
Location: 3434 - 3898 (-)
Type: pfam
Location: 3434 - 3898 (-)
Gene ID: Rep_770_c_35_6
Type: TC
Location: 4086 - 5405 (+)
Type: TC
Location: 4086 - 5405 (+)
Gene ID: Rep_770_c_35_7
Type: TC
Location: 5437 - 6339 (-)
Type: TC
Location: 5437 - 6339 (-)
Gene ID: Rep_770_c_35_8
Type: TC
Location: 6458 - 7135 (-)
Type: TC
Location: 6458 - 7135 (-)
Gene ID: Rep_770_c_35_9
Type: TC
Location: 7147 - 7938 (-)
Type: TC
Location: 7147 - 7938 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.