Cluster: Rep_770_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_770
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_770_c_20 | Rep_770_c_20_2 | 1693 | 2853 | - | GT4 |
| pfam | Rep_770_c_20 | Rep_770_c_20_3 | 3026 | 4180 | + | Biotin_lipoyl_2 | HlyD_D23 |
| TC | Rep_770_c_20 | Rep_770_c_20_4 | 4180 | 7437 | + | 2.A.6.2.16 |
| TC | Rep_770_c_20 | Rep_770_c_20_5 | 7427 | 8908 | + | 2.A.6.2.14 |
Gene ID: Rep_770_c_20_2
Type: CAZyme
Location: 1693 - 2853 (-)
Type: CAZyme
Location: 1693 - 2853 (-)
Gene ID: Rep_770_c_20_3
Type: pfam
Location: 3026 - 4180 (+)
Type: pfam
Location: 3026 - 4180 (+)
Gene ID: Rep_770_c_20_4
Type: TC
Location: 4180 - 7437 (+)
Type: TC
Location: 4180 - 7437 (+)
Gene ID: Rep_770_c_20_5
Type: TC
Location: 7427 - 8908 (+)
Type: TC
Location: 7427 - 8908 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.