Cluster: Rep_76_CGC47
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 8
- Substrate:
- Genome ID: Rep_76
- CGC Family ID: CGCFAM_00069
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_76_c_18 | Rep_76_c_18_31 | 35987 | 37072 | - | GT2 |
| pfam | Rep_76_c_18 | Rep_76_c_18_32 | 37012 | 37890 | - | Lip_A_acyltrans |
| pfam | Rep_76_c_18 | Rep_76_c_18_33 | 37929 | 39239 | - | UPF0004 | Radical_SAM |
| TC | Rep_76_c_18 | Rep_76_c_18_34 | 39430 | 41097 | + | 4.C.1.1.4 |
| NULL(UNKNOWN) | Rep_76_c_18 | Rep_76_c_18_35 | 41275 | 41496 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_76_c_18 | Rep_76_c_18_36 | 41658 | 42518 | + | 3.A.1.103.5 |
| NULL(UNKNOWN) | Rep_76_c_18 | Rep_76_c_18_37 | 42518 | 43465 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_76_c_18 | Rep_76_c_18_38 | 43459 | 44265 | + | Glycos_transf_2 |
| TC | Rep_76_c_18 | Rep_76_c_18_39 | 44278 | 45543 | + | 3.A.1.103.5 |
| CAZyme | Rep_76_c_18 | Rep_76_c_18_40 | 45547 | 46452 | + | GT11 |
| CAZyme | Rep_76_c_18 | Rep_76_c_18_41 | 46449 | 47396 | + | GT2 |
| CAZyme | Rep_76_c_18 | Rep_76_c_18_42 | 47396 | 48241 | + | GT2 |
| pfam | Rep_76_c_18 | Rep_76_c_18_43 | 48258 | 49148 | + | Glyco_tranf_2_5 |
| CAZyme | Rep_76_c_18 | Rep_76_c_18_44 | 49151 | 50056 | + | GT2 |
| CAZyme | Rep_76_c_18 | Rep_76_c_18_45 | 50053 | 50841 | + | GT2 |
| CAZyme | Rep_76_c_18 | Rep_76_c_18_46 | 50852 | 51697 | + | GT2 |
| CAZyme | Rep_76_c_18 | Rep_76_c_18_47 | 51763 | 52617 | + | GT2 |
Gene ID: Rep_76_c_18_31
Type: CAZyme
Location: 35987 - 37072 (-)
Type: CAZyme
Location: 35987 - 37072 (-)
Gene ID: Rep_76_c_18_32
Type: pfam
Location: 37012 - 37890 (-)
Type: pfam
Location: 37012 - 37890 (-)
Gene ID: Rep_76_c_18_33
Type: pfam
Location: 37929 - 39239 (-)
Type: pfam
Location: 37929 - 39239 (-)
Gene ID: Rep_76_c_18_34
Type: TC
Location: 39430 - 41097 (+)
Type: TC
Location: 39430 - 41097 (+)
Gene ID: Rep_76_c_18_35
Type:
Location: 41275 - 41496 (+)
Type:
Location: 41275 - 41496 (+)
Gene ID: Rep_76_c_18_36
Type: TC
Location: 41658 - 42518 (+)
Type: TC
Location: 41658 - 42518 (+)
Gene ID: Rep_76_c_18_37
Type:
Location: 42518 - 43465 (+)
Type:
Location: 42518 - 43465 (+)
Gene ID: Rep_76_c_18_38
Type: pfam
Location: 43459 - 44265 (+)
Type: pfam
Location: 43459 - 44265 (+)
Gene ID: Rep_76_c_18_39
Type: TC
Location: 44278 - 45543 (+)
Type: TC
Location: 44278 - 45543 (+)
Gene ID: Rep_76_c_18_40
Type: CAZyme
Location: 45547 - 46452 (+)
Type: CAZyme
Location: 45547 - 46452 (+)
Gene ID: Rep_76_c_18_41
Type: CAZyme
Location: 46449 - 47396 (+)
Type: CAZyme
Location: 46449 - 47396 (+)
Gene ID: Rep_76_c_18_42
Type: CAZyme
Location: 47396 - 48241 (+)
Type: CAZyme
Location: 47396 - 48241 (+)
Gene ID: Rep_76_c_18_43
Type: pfam
Location: 48258 - 49148 (+)
Type: pfam
Location: 48258 - 49148 (+)
Gene ID: Rep_76_c_18_44
Type: CAZyme
Location: 49151 - 50056 (+)
Type: CAZyme
Location: 49151 - 50056 (+)
Gene ID: Rep_76_c_18_45
Type: CAZyme
Location: 50053 - 50841 (+)
Type: CAZyme
Location: 50053 - 50841 (+)
Gene ID: Rep_76_c_18_46
Type: CAZyme
Location: 50852 - 51697 (+)
Type: CAZyme
Location: 50852 - 51697 (+)
Gene ID: Rep_76_c_18_47
Type: CAZyme
Location: 51763 - 52617 (+)
Type: CAZyme
Location: 51763 - 52617 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.