Cluster: Rep_76_CGC45
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_76
- CGC Family ID: CGCFAM_05435
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_76_c_18 | Rep_76_c_18_2 | 1276 | 2376 | + | 2.A.6.2.28 |
| TC | Rep_76_c_18 | Rep_76_c_18_3 | 2444 | 5479 | + | 2.A.6.2.33 |
| pfam | Rep_76_c_18 | Rep_76_c_18_4 | 5591 | 6913 | + | OEP | OEP |
| TC | Rep_76_c_18 | Rep_76_c_18_5 | 6976 | 8931 | - | 9.B.18.2.1 |
| STP | Rep_76_c_18 | Rep_76_c_18_6 | 8950 | 10092 | - | Aminotran_1_2 |
| pfam | Rep_76_c_18 | Rep_76_c_18_7 | 10094 | 10684 | - | Hexapep | Hexapep_2 | PglD_N |
| TC | Rep_76_c_18 | Rep_76_c_18_8 | 10686 | 11291 | - | 9.B.18.1.2 |
| CAZyme | Rep_76_c_18 | Rep_76_c_18_9 | 11291 | 12436 | - | GT4 |
| pfam | Rep_76_c_18 | Rep_76_c_18_10 | 12552 | 13685 | - | Epimerase_2 |
| pfam | Rep_76_c_18 | Rep_76_c_18_11 | 13715 | 14833 | - | Epimerase | NAD_binding_4 | Polysacc_synt_C |
| TC | Rep_76_c_18 | Rep_76_c_18_12 | 14830 | 15846 | - | 9.B.18.2.1 |
| TC | Rep_76_c_18 | Rep_76_c_18_13 | 15854 | 17398 | - | 2.A.66.4.7 |
| NULL(UNKNOWN) | Rep_76_c_18 | Rep_76_c_18_14 | 17398 | 18687 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_76_c_18 | Rep_76_c_18_15 | 18821 | 20026 | - | GT4 |
Gene ID: Rep_76_c_18_2
Type: TC
Location: 1276 - 2376 (+)
Type: TC
Location: 1276 - 2376 (+)
Gene ID: Rep_76_c_18_3
Type: TC
Location: 2444 - 5479 (+)
Type: TC
Location: 2444 - 5479 (+)
Gene ID: Rep_76_c_18_4
Type: pfam
Location: 5591 - 6913 (+)
Type: pfam
Location: 5591 - 6913 (+)
Gene ID: Rep_76_c_18_5
Type: TC
Location: 6976 - 8931 (-)
Type: TC
Location: 6976 - 8931 (-)
Gene ID: Rep_76_c_18_6
Type: STP
Location: 8950 - 10092 (-)
Type: STP
Location: 8950 - 10092 (-)
Gene ID: Rep_76_c_18_7
Type: pfam
Location: 10094 - 10684 (-)
Type: pfam
Location: 10094 - 10684 (-)
Gene ID: Rep_76_c_18_8
Type: TC
Location: 10686 - 11291 (-)
Type: TC
Location: 10686 - 11291 (-)
Gene ID: Rep_76_c_18_9
Type: CAZyme
Location: 11291 - 12436 (-)
Type: CAZyme
Location: 11291 - 12436 (-)
Gene ID: Rep_76_c_18_10
Type: pfam
Location: 12552 - 13685 (-)
Type: pfam
Location: 12552 - 13685 (-)
Gene ID: Rep_76_c_18_11
Type: pfam
Location: 13715 - 14833 (-)
Type: pfam
Location: 13715 - 14833 (-)
Gene ID: Rep_76_c_18_12
Type: TC
Location: 14830 - 15846 (-)
Type: TC
Location: 14830 - 15846 (-)
Gene ID: Rep_76_c_18_13
Type: TC
Location: 15854 - 17398 (-)
Type: TC
Location: 15854 - 17398 (-)
Gene ID: Rep_76_c_18_14
Type:
Location: 17398 - 18687 (-)
Type:
Location: 17398 - 18687 (-)
Gene ID: Rep_76_c_18_15
Type: CAZyme
Location: 18821 - 20026 (-)
Type: CAZyme
Location: 18821 - 20026 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.