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Cluster: Rep_76_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_76_c_16 Rep_76_c_16_38 57836 60049 + GH3
pfam Rep_76_c_16 Rep_76_c_16_39 60128 61795 - FTHFS
TC Rep_76_c_16 Rep_76_c_16_40 62292 64130 + 3.A.6.1.1
TC Rep_76_c_16 Rep_76_c_16_41 64227 65159 + 2.A.4.1.3
Gene ID: Rep_76_c_16_38
Type: CAZyme
Location: 57836 - 60049 (+)
Gene ID: Rep_76_c_16_39
Type: pfam
Location: 60128 - 61795 (-)
Gene ID: Rep_76_c_16_40
Type: TC
Location: 62292 - 64130 (+)
Gene ID: Rep_76_c_16_41
Type: TC
Location: 64227 - 65159 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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