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Cluster: Rep_76_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_76_c_14 Rep_76_c_14_24 23436 26429 + 1.B.14.6.1
sulfatase Rep_76_c_14 Rep_76_c_14_25 26448 28013 + S1_27
CAZyme Rep_76_c_14 Rep_76_c_14_26 28251 29201 + GH43_31
CAZyme Rep_76_c_14 Rep_76_c_14_27 29551 31206 + GH93
CAZyme Rep_76_c_14 Rep_76_c_14_28 31700 33715 + GH182
CAZyme Rep_76_c_14 Rep_76_c_14_29 34067 35077 + GH43_3
CAZyme Rep_76_c_14 Rep_76_c_14_30 35295 37103 + GH2
Gene ID: Rep_76_c_14_24
Type: TC
Location: 23436 - 26429 (+)
Gene ID: Rep_76_c_14_25
Type: sulfatase
Location: 26448 - 28013 (+)
Gene ID: Rep_76_c_14_26
Type: CAZyme
Location: 28251 - 29201 (+)
Gene ID: Rep_76_c_14_27
Type: CAZyme
Location: 29551 - 31206 (+)
Gene ID: Rep_76_c_14_28
Type: CAZyme
Location: 31700 - 33715 (+)
Gene ID: Rep_76_c_14_29
Type: CAZyme
Location: 34067 - 35077 (+)
Gene ID: Rep_76_c_14_30
Type: CAZyme
Location: 35295 - 37103 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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