Cluster: Rep_76_CGC37
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_76
- CGC Family ID: CGCFAM_00061
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_76_c_11 | Rep_76_c_11_26 | 24338 | 25462 | - | 1.I.1.1.3 |
| NULL(UNKNOWN) | Rep_76_c_11 | Rep_76_c_11_27 | 25925 | 28939 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_76_c_11 | Rep_76_c_11_28 | 29168 | 30643 | - | 8.A.46.1.2 |
| TC | Rep_76_c_11 | Rep_76_c_11_29 | 30663 | 33779 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | Rep_76_c_11 | Rep_76_c_11_30 | 34065 | 34376 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_76_c_11 | Rep_76_c_11_31 | 34819 | 35982 | + | GH171 |
| CAZyme | Rep_76_c_11 | Rep_76_c_11_32 | 36008 | 37465 | + | GT2 |
| pfam | Rep_76_c_11 | Rep_76_c_11_33 | 37551 | 38504 | + | DUF4922 | Ap4A_phos_N |
| pfam | Rep_76_c_11 | Rep_76_c_11_34 | 38489 | 39784 | + | SpoIID |
| TC | Rep_76_c_11 | Rep_76_c_11_35 | 39810 | 41681 | + | 2.A.1.25.5 |
| CAZyme | Rep_76_c_11 | Rep_76_c_11_36 | 41696 | 42931 | + | GH171 |
Gene ID: Rep_76_c_11_26
Type: TC
Location: 24338 - 25462 (-)
Type: TC
Location: 24338 - 25462 (-)
Gene ID: Rep_76_c_11_27
Type:
Location: 25925 - 28939 (-)
Type:
Location: 25925 - 28939 (-)
Gene ID: Rep_76_c_11_28
Type: TC
Location: 29168 - 30643 (-)
Type: TC
Location: 29168 - 30643 (-)
Gene ID: Rep_76_c_11_29
Type: TC
Location: 30663 - 33779 (-)
Type: TC
Location: 30663 - 33779 (-)
Gene ID: Rep_76_c_11_30
Type:
Location: 34065 - 34376 (-)
Type:
Location: 34065 - 34376 (-)
Gene ID: Rep_76_c_11_31
Type: CAZyme
Location: 34819 - 35982 (+)
Type: CAZyme
Location: 34819 - 35982 (+)
Gene ID: Rep_76_c_11_32
Type: CAZyme
Location: 36008 - 37465 (+)
Type: CAZyme
Location: 36008 - 37465 (+)
Gene ID: Rep_76_c_11_33
Type: pfam
Location: 37551 - 38504 (+)
Type: pfam
Location: 37551 - 38504 (+)
Gene ID: Rep_76_c_11_34
Type: pfam
Location: 38489 - 39784 (+)
Type: pfam
Location: 38489 - 39784 (+)
Gene ID: Rep_76_c_11_35
Type: TC
Location: 39810 - 41681 (+)
Type: TC
Location: 39810 - 41681 (+)
Gene ID: Rep_76_c_11_36
Type: CAZyme
Location: 41696 - 42931 (+)
Type: CAZyme
Location: 41696 - 42931 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.