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Cluster: Rep_76_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_76_c_3 Rep_76_c_3_157 206443 207369 + GT2
TC Rep_76_c_3 Rep_76_c_3_158 207573 207926 + 3.D.1.8.1
TC Rep_76_c_3 Rep_76_c_3_159 207917 208501 + 3.D.1.6.1
TC Rep_76_c_3 Rep_76_c_3_160 208561 210192 + 3.D.1.5.1
TC Rep_76_c_3 Rep_76_c_3_161 210304 211410 + 3.D.1.5.1
STP Rep_76_c_3 Rep_76_c_3_162 211430 212017 + Fer4 | Fer4
TC Rep_76_c_3 Rep_76_c_3_163 212041 212544 + 3.D.9.1.1
TC Rep_76_c_3 Rep_76_c_3_164 212565 212909 + 3.D.1.8.1
TC Rep_76_c_3 Rep_76_c_3_165 212931 214868 + 3.D.9.1.1
TC Rep_76_c_3 Rep_76_c_3_166 214892 216370 + 3.D.1.5.1
TC Rep_76_c_3 Rep_76_c_3_167 216412 217836 + 3.D.9.1.1
TC Rep_76_c_3 Rep_76_c_3_168 217926 218633 + 1.A.30.2.9
Gene ID: Rep_76_c_3_157
Type: CAZyme
Location: 206443 - 207369 (+)
Gene ID: Rep_76_c_3_158
Type: TC
Location: 207573 - 207926 (+)
Gene ID: Rep_76_c_3_159
Type: TC
Location: 207917 - 208501 (+)
Gene ID: Rep_76_c_3_160
Type: TC
Location: 208561 - 210192 (+)
Gene ID: Rep_76_c_3_161
Type: TC
Location: 210304 - 211410 (+)
Gene ID: Rep_76_c_3_162
Type: STP
Location: 211430 - 212017 (+)
Gene ID: Rep_76_c_3_163
Type: TC
Location: 212041 - 212544 (+)
Gene ID: Rep_76_c_3_164
Type: TC
Location: 212565 - 212909 (+)
Gene ID: Rep_76_c_3_165
Type: TC
Location: 212931 - 214868 (+)
Gene ID: Rep_76_c_3_166
Type: TC
Location: 214892 - 216370 (+)
Gene ID: Rep_76_c_3_167
Type: TC
Location: 216412 - 217836 (+)
Gene ID: Rep_76_c_3_168
Type: TC
Location: 217926 - 218633 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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