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Cluster: Rep_76_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_76_c_3 Rep_76_c_3_83 108141 108794 + 9.B.114.1.1
pfam Rep_76_c_3 Rep_76_c_3_84 108893 110035 + Porin_O_P
CAZyme Rep_76_c_3 Rep_76_c_3_85 110128 110991 + GT14
CAZyme Rep_76_c_3 Rep_76_c_3_86 111034 113169 - GH92
Gene ID: Rep_76_c_3_83
Type: TC
Location: 108141 - 108794 (+)
Gene ID: Rep_76_c_3_84
Type: pfam
Location: 108893 - 110035 (+)
Gene ID: Rep_76_c_3_85
Type: CAZyme
Location: 110128 - 110991 (+)
Gene ID: Rep_76_c_3_86
Type: CAZyme
Location: 111034 - 113169 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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