Cluster: Rep_76_CGC13
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_76
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_76_c_2 | Rep_76_c_2_112 | 111166 | 113328 | + | 9.A.25.1.1 |
| pfam | Rep_76_c_2 | Rep_76_c_2_113 | 113356 | 114243 | + | GldL_N |
| TC | Rep_76_c_2 | Rep_76_c_2_114 | 114297 | 115865 | + | 9.A.25.1.1 |
| pfam | Rep_76_c_2 | Rep_76_c_2_115 | 115887 | 116759 | + | GldN |
| CAZyme | Rep_76_c_2 | Rep_76_c_2_116 | 117269 | 118639 | - | GH13 |
| TC | Rep_76_c_2 | Rep_76_c_2_117 | 118675 | 120012 | - | 2.A.2.6.3 |
| TF | Rep_76_c_2 | Rep_76_c_2_118 | 120047 | 121072 | - | LacI |
| CAZyme | Rep_76_c_2 | Rep_76_c_2_119 | 121109 | 122953 | - | GH13_46 |
| CAZyme | Rep_76_c_2 | Rep_76_c_2_120 | 122974 | 125640 | - | CBM20 | GH77 |
| pfam | Rep_76_c_2 | Rep_76_c_2_121 | 125892 | 127436 | - | Fer4_5 | Fer4_5 | Fer4_7 | Fer4_8 |
| pfam | Rep_76_c_2 | Rep_76_c_2_122 | 127458 | 128396 | - | DUF362 |
| TC | Rep_76_c_2 | Rep_76_c_2_123 | 128426 | 130327 | - | 1.B.14.1.13 |
Gene ID: Rep_76_c_2_112
Type: TC
Location: 111166 - 113328 (+)
Type: TC
Location: 111166 - 113328 (+)
Gene ID: Rep_76_c_2_113
Type: pfam
Location: 113356 - 114243 (+)
Type: pfam
Location: 113356 - 114243 (+)
Gene ID: Rep_76_c_2_114
Type: TC
Location: 114297 - 115865 (+)
Type: TC
Location: 114297 - 115865 (+)
Gene ID: Rep_76_c_2_115
Type: pfam
Location: 115887 - 116759 (+)
Type: pfam
Location: 115887 - 116759 (+)
Gene ID: Rep_76_c_2_116
Type: CAZyme
Location: 117269 - 118639 (-)
Type: CAZyme
Location: 117269 - 118639 (-)
Gene ID: Rep_76_c_2_117
Type: TC
Location: 118675 - 120012 (-)
Type: TC
Location: 118675 - 120012 (-)
Gene ID: Rep_76_c_2_118
Type: TF
Location: 120047 - 121072 (-)
Type: TF
Location: 120047 - 121072 (-)
Gene ID: Rep_76_c_2_119
Type: CAZyme
Location: 121109 - 122953 (-)
Type: CAZyme
Location: 121109 - 122953 (-)
Gene ID: Rep_76_c_2_120
Type: CAZyme
Location: 122974 - 125640 (-)
Type: CAZyme
Location: 122974 - 125640 (-)
Gene ID: Rep_76_c_2_121
Type: pfam
Location: 125892 - 127436 (-)
Type: pfam
Location: 125892 - 127436 (-)
Gene ID: Rep_76_c_2_122
Type: pfam
Location: 127458 - 128396 (-)
Type: pfam
Location: 127458 - 128396 (-)
Gene ID: Rep_76_c_2_123
Type: TC
Location: 128426 - 130327 (-)
Type: TC
Location: 128426 - 130327 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.