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Cluster: Rep_76_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_76_c_0 Rep_76_c_0_111 114832 115587 - 3.D.10.1.5
TC Rep_76_c_0 Rep_76_c_0_112 115599 117557 - 3.D.10.1.5
NULL(UNKNOWN) Rep_76_c_0 Rep_76_c_0_113 117599 118300 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_76_c_0 Rep_76_c_0_114 118920 119120 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_76_c_0 Rep_76_c_0_115 119113 120174 - GT4
Gene ID: Rep_76_c_0_111
Type: TC
Location: 114832 - 115587 (-)
Gene ID: Rep_76_c_0_112
Type: TC
Location: 115599 - 117557 (-)
Gene ID: Rep_76_c_0_113
Type:
Location: 117599 - 118300 (-)
Gene ID: Rep_76_c_0_114
Type:
Location: 118920 - 119120 (+)
Gene ID: Rep_76_c_0_115
Type: CAZyme
Location: 119113 - 120174 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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