Cluster: Rep_745_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_745
- CGC Family ID: CGCFAM_11220
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_745_c_4 | Rep_745_c_4_15 | 14193 | 14810 | + | 2.A.95.1.4 |
| TF | Rep_745_c_4 | Rep_745_c_4_16 | 14942 | 15982 | - | GntR |
| CAZyme | Rep_745_c_4 | Rep_745_c_4_17 | 16343 | 17509 | + | GH109 |
| pfam | Rep_745_c_4 | Rep_745_c_4_18 | 17661 | 18602 | + | AP_endonuc_2 |
| pfam | Rep_745_c_4 | Rep_745_c_4_19 | 18762 | 20120 | - | Mur_ligase | Mur_ligase_C |
| CAZyme | Rep_745_c_4 | Rep_745_c_4_20 | 20117 | 21667 | - | GH63 |
Gene ID: Rep_745_c_4_15
Type: TC
Location: 14193 - 14810 (+)
Type: TC
Location: 14193 - 14810 (+)
Gene ID: Rep_745_c_4_16
Type: TF
Location: 14942 - 15982 (-)
Type: TF
Location: 14942 - 15982 (-)
Gene ID: Rep_745_c_4_17
Type: CAZyme
Location: 16343 - 17509 (+)
Type: CAZyme
Location: 16343 - 17509 (+)
Gene ID: Rep_745_c_4_18
Type: pfam
Location: 17661 - 18602 (+)
Type: pfam
Location: 17661 - 18602 (+)
Gene ID: Rep_745_c_4_19
Type: pfam
Location: 18762 - 20120 (-)
Type: pfam
Location: 18762 - 20120 (-)
Gene ID: Rep_745_c_4_20
Type: CAZyme
Location: 20117 - 21667 (-)
Type: CAZyme
Location: 20117 - 21667 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
UBA1829
Genus
CAJMAW01
Species
CAJMAW01 sp905211485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.