dbCAN Logo

Cluster: Rep_745_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_745_c_45 Rep_745_c_45_1 297 2324 - 3.D.1.6.1
TC Rep_745_c_45 Rep_745_c_45_2 2344 4251 - 3.D.1.5.1
TC Rep_745_c_45 Rep_745_c_45_3 4251 4763 - 3.D.1.5.1
STP Rep_745_c_45 Rep_745_c_45_4 5509 7248 + Pyr_redox_2
pfam Rep_745_c_45 Rep_745_c_45_5 7268 7813 + Cupin_5
TC Rep_745_c_45 Rep_745_c_45_6 7794 8459 - 9.B.20.1.4
CAZyme Rep_745_c_45 Rep_745_c_45_7 8898 10097 + GH33
pfam Rep_745_c_45 Rep_745_c_45_8 10345 11127 - FAD_binding_3 | Thi4 | NAD_binding_8
STP Rep_745_c_45 Rep_745_c_45_9 11425 12705 - EPSP_synthase
TC Rep_745_c_45 Rep_745_c_45_10 12735 13736 - 2.A.4.7.9
CAZyme Rep_745_c_45 Rep_745_c_45_11 14315 14956 + GH23
Gene ID: Rep_745_c_45_1
Type: TC
Location: 297 - 2324 (-)
Gene ID: Rep_745_c_45_2
Type: TC
Location: 2344 - 4251 (-)
Gene ID: Rep_745_c_45_3
Type: TC
Location: 4251 - 4763 (-)
Gene ID: Rep_745_c_45_4
Type: STP
Location: 5509 - 7248 (+)
Gene ID: Rep_745_c_45_5
Type: pfam
Location: 7268 - 7813 (+)
Gene ID: Rep_745_c_45_6
Type: TC
Location: 7794 - 8459 (-)
Gene ID: Rep_745_c_45_7
Type: CAZyme
Location: 8898 - 10097 (+)
Gene ID: Rep_745_c_45_8
Type: pfam
Location: 10345 - 11127 (-)
Gene ID: Rep_745_c_45_9
Type: STP
Location: 11425 - 12705 (-)
Gene ID: Rep_745_c_45_10
Type: TC
Location: 12735 - 13736 (-)
Gene ID: Rep_745_c_45_11
Type: CAZyme
Location: 14315 - 14956 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List