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Cluster: Rep_745_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_745_c_1 Rep_745_c_1_10 17660 18280 + GH29
sulfatase Rep_745_c_1 Rep_745_c_1_11 18391 19746 + S1_16
TC Rep_745_c_1 Rep_745_c_1_12 20492 21487 + 3.A.1.105.15
TC Rep_745_c_1 Rep_745_c_1_13 21490 23400 + 3.A.1.105.15
TC Rep_745_c_1 Rep_745_c_1_14 23397 24524 + 3.A.1.105.15
NULL(UNKNOWN) Rep_745_c_1 Rep_745_c_1_15 24528 24698 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_745_c_1 Rep_745_c_1_16 24797 25969 + 3.A.1.105.15
TC Rep_745_c_1 Rep_745_c_1_17 26040 27560 - 2.A.20.2.7
pfam Rep_745_c_1 Rep_745_c_1_18 27579 28718 - SBP_bac_6
CAZyme Rep_745_c_1 Rep_745_c_1_19 29025 30650 + GT2
pfam Rep_745_c_1 Rep_745_c_1_20 30625 31368 + SBP_bac_10 | N_methyl
CAZyme Rep_745_c_1 Rep_745_c_1_21 31579 34398 + GH5
Gene ID: Rep_745_c_1_10
Type: CAZyme
Location: 17660 - 18280 (+)
Gene ID: Rep_745_c_1_11
Type: sulfatase
Location: 18391 - 19746 (+)
Gene ID: Rep_745_c_1_12
Type: TC
Location: 20492 - 21487 (+)
Gene ID: Rep_745_c_1_13
Type: TC
Location: 21490 - 23400 (+)
Gene ID: Rep_745_c_1_14
Type: TC
Location: 23397 - 24524 (+)
Gene ID: Rep_745_c_1_15
Type:
Location: 24528 - 24698 (+)
Gene ID: Rep_745_c_1_16
Type: TC
Location: 24797 - 25969 (+)
Gene ID: Rep_745_c_1_17
Type: TC
Location: 26040 - 27560 (-)
Gene ID: Rep_745_c_1_18
Type: pfam
Location: 27579 - 28718 (-)
Gene ID: Rep_745_c_1_19
Type: CAZyme
Location: 29025 - 30650 (+)
Gene ID: Rep_745_c_1_20
Type: pfam
Location: 30625 - 31368 (+)
Gene ID: Rep_745_c_1_21
Type: CAZyme
Location: 31579 - 34398 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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