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Cluster: Rep_739_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_739_c_0 Rep_739_c_0_273 331810 335088 + GH148 | GH148
STP Rep_739_c_0 Rep_739_c_0_274 335276 336451 + Fer4
pfam Rep_739_c_0 Rep_739_c_0_275 336617 337642 + NMO
TC Rep_739_c_0 Rep_739_c_0_276 337644 339407 + 3.A.1.106.2
NULL(UNKNOWN) Rep_739_c_0 Rep_739_c_0_277 339568 340632 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_739_c_0 Rep_739_c_0_278 340650 341393 + SBP_bac_10
CAZyme Rep_739_c_0 Rep_739_c_0_279 341407 342969 + CE20
pfam Rep_739_c_0 Rep_739_c_0_280 342988 346938 + BetaGal_ABD2
pfam Rep_739_c_0 Rep_739_c_0_281 346954 348582 + BNR_2
TC Rep_739_c_0 Rep_739_c_0_282 348702 352166 - 1.I.1.1.3
TC Rep_739_c_0 Rep_739_c_0_283 352343 353761 - 2.A.66.1.28
Gene ID: Rep_739_c_0_273
Type: CAZyme
Location: 331810 - 335088 (+)
Gene ID: Rep_739_c_0_274
Type: STP
Location: 335276 - 336451 (+)
Gene ID: Rep_739_c_0_275
Type: pfam
Location: 336617 - 337642 (+)
Gene ID: Rep_739_c_0_276
Type: TC
Location: 337644 - 339407 (+)
Gene ID: Rep_739_c_0_277
Type:
Location: 339568 - 340632 (+)
Gene ID: Rep_739_c_0_278
Type: pfam
Location: 340650 - 341393 (+)
Gene ID: Rep_739_c_0_279
Type: CAZyme
Location: 341407 - 342969 (+)
Gene ID: Rep_739_c_0_280
Type: pfam
Location: 342988 - 346938 (+)
Gene ID: Rep_739_c_0_281
Type: pfam
Location: 346954 - 348582 (+)
Gene ID: Rep_739_c_0_282
Type: TC
Location: 348702 - 352166 (-)
Gene ID: Rep_739_c_0_283
Type: TC
Location: 352343 - 353761 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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