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Cluster: Rep_739_CGC64

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_739_c_18 Rep_739_c_18_80 98733 99683 - 3.A.1.2.13
TC Rep_739_c_18 Rep_739_c_18_81 99688 101163 - 3.A.1.2.1
TC Rep_739_c_18 Rep_739_c_18_82 101171 102004 - 3.A.1.132.3
pfam Rep_739_c_18 Rep_739_c_18_83 102040 102531 - CTP_transf_like
NULL(UNKNOWN) Rep_739_c_18 Rep_739_c_18_84 102531 103127 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_739_c_18 Rep_739_c_18_85 103272 104444 + 2.A.21.9.1
TF Rep_739_c_18 Rep_739_c_18_86 104451 105809 + HTH_8
CAZyme Rep_739_c_18 Rep_739_c_18_87 105815 107650 + GH20
Gene ID: Rep_739_c_18_80
Type: TC
Location: 98733 - 99683 (-)
Gene ID: Rep_739_c_18_81
Type: TC
Location: 99688 - 101163 (-)
Gene ID: Rep_739_c_18_82
Type: TC
Location: 101171 - 102004 (-)
Gene ID: Rep_739_c_18_83
Type: pfam
Location: 102040 - 102531 (-)
Gene ID: Rep_739_c_18_84
Type:
Location: 102531 - 103127 (-)
Gene ID: Rep_739_c_18_85
Type: TC
Location: 103272 - 104444 (+)
Gene ID: Rep_739_c_18_86
Type: TF
Location: 104451 - 105809 (+)
Gene ID: Rep_739_c_18_87
Type: CAZyme
Location: 105815 - 107650 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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