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Cluster: Rep_739_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_739_c_17 Rep_739_c_17_201 236011 236811 + 3.A.1.15.2
CAZyme Rep_739_c_17 Rep_739_c_17_202 237033 239240 - CBM67 | GH78
pfam Rep_739_c_17 Rep_739_c_17_203 239533 240714 + Chorismate_synt
pfam Rep_739_c_17 Rep_739_c_17_204 240840 242978 + DEAD | DEAD_2 | Helicase_C_2
CAZyme Rep_739_c_17 Rep_739_c_17_205 243012 244085 - GT2
CAZyme Rep_739_c_17 Rep_739_c_17_206 244082 245836 - GT2
CAZyme Rep_739_c_17 Rep_739_c_17_207 245870 246823 - GT2
pfam Rep_739_c_17 Rep_739_c_17_208 246827 248050 - Glycos_transf_1 | Glyco_trans_1_4
pfam Rep_739_c_17 Rep_739_c_17_209 248067 249647 - Methyltransf_23
TC Rep_739_c_17 Rep_739_c_17_210 249644 250972 - 3.A.1.103.6
TC Rep_739_c_17 Rep_739_c_17_211 250962 251789 - 3.A.1.104.1
Gene ID: Rep_739_c_17_201
Type: TC
Location: 236011 - 236811 (+)
Gene ID: Rep_739_c_17_202
Type: CAZyme
Location: 237033 - 239240 (-)
Gene ID: Rep_739_c_17_203
Type: pfam
Location: 239533 - 240714 (+)
Gene ID: Rep_739_c_17_204
Type: pfam
Location: 240840 - 242978 (+)
Gene ID: Rep_739_c_17_205
Type: CAZyme
Location: 243012 - 244085 (-)
Gene ID: Rep_739_c_17_206
Type: CAZyme
Location: 244082 - 245836 (-)
Gene ID: Rep_739_c_17_207
Type: CAZyme
Location: 245870 - 246823 (-)
Gene ID: Rep_739_c_17_208
Type: pfam
Location: 246827 - 248050 (-)
Gene ID: Rep_739_c_17_209
Type: pfam
Location: 248067 - 249647 (-)
Gene ID: Rep_739_c_17_210
Type: TC
Location: 249644 - 250972 (-)
Gene ID: Rep_739_c_17_211
Type: TC
Location: 250962 - 251789 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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