Cluster: Rep_739_CGC57
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_739
- CGC Family ID: CGCFAM_01966
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_739_c_17 | Rep_739_c_17_168 | 195402 | 197585 | - | GH31 |
| CAZyme | Rep_739_c_17 | Rep_739_c_17_169 | 197859 | 199142 | + | GT30 |
| pfam | Rep_739_c_17 | Rep_739_c_17_170 | 199151 | 200431 | + | ThiC_Rad_SAM |
| pfam | Rep_739_c_17 | Rep_739_c_17_171 | 200435 | 200929 | + | dCMP_cyt_deam_1 | MafB19-deam |
| TC | Rep_739_c_17 | Rep_739_c_17_172 | 201311 | 202555 | + | 9.B.174.1.1 |
Gene ID: Rep_739_c_17_168
Type: CAZyme
Location: 195402 - 197585 (-)
Type: CAZyme
Location: 195402 - 197585 (-)
Gene ID: Rep_739_c_17_169
Type: CAZyme
Location: 197859 - 199142 (+)
Type: CAZyme
Location: 197859 - 199142 (+)
Gene ID: Rep_739_c_17_170
Type: pfam
Location: 199151 - 200431 (+)
Type: pfam
Location: 199151 - 200431 (+)
Gene ID: Rep_739_c_17_171
Type: pfam
Location: 200435 - 200929 (+)
Type: pfam
Location: 200435 - 200929 (+)
Gene ID: Rep_739_c_17_172
Type: TC
Location: 201311 - 202555 (+)
Type: TC
Location: 201311 - 202555 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
UBA1829
Genus
UBA1829
Species
UBA1829 sp905197955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.