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Cluster: Rep_739_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_739_c_15 Rep_739_c_15_502 584184 585281 - GT4
TC Rep_739_c_15 Rep_739_c_15_503 585297 586706 - 9.B.18.1.2
pfam Rep_739_c_15 Rep_739_c_15_504 587031 588338 + FAD_binding_2 | GIDA | Thi4 | Pyr_redox_2 | FAD_oxidored | NAD_binding_8
CAZyme Rep_739_c_15 Rep_739_c_15_505 588526 589740 + GH29
TC Rep_739_c_15 Rep_739_c_15_506 590056 590673 + 3.D.6.1.4
TC Rep_739_c_15 Rep_739_c_15_507 590686 591528 + 3.D.6.1.3
TC Rep_739_c_15 Rep_739_c_15_508 591525 592856 + 3.D.6.1.2
TC Rep_739_c_15 Rep_739_c_15_509 592871 593914 + 3.D.6.1.2
pfam Rep_739_c_15 Rep_739_c_15_510 593911 594588 + FMN_bind
TC Rep_739_c_15 Rep_739_c_15_511 594591 595262 + 3.D.6.1.2
pfam Rep_739_c_15 Rep_739_c_15_512 595320 597218 + PGAP1
CAZyme Rep_739_c_15 Rep_739_c_15_513 597321 599321 + GH151
Gene ID: Rep_739_c_15_502
Type: CAZyme
Location: 584184 - 585281 (-)
Gene ID: Rep_739_c_15_503
Type: TC
Location: 585297 - 586706 (-)
Gene ID: Rep_739_c_15_504
Type: pfam
Location: 587031 - 588338 (+)
Gene ID: Rep_739_c_15_505
Type: CAZyme
Location: 588526 - 589740 (+)
Gene ID: Rep_739_c_15_506
Type: TC
Location: 590056 - 590673 (+)
Gene ID: Rep_739_c_15_507
Type: TC
Location: 590686 - 591528 (+)
Gene ID: Rep_739_c_15_508
Type: TC
Location: 591525 - 592856 (+)
Gene ID: Rep_739_c_15_509
Type: TC
Location: 592871 - 593914 (+)
Gene ID: Rep_739_c_15_510
Type: pfam
Location: 593911 - 594588 (+)
Gene ID: Rep_739_c_15_511
Type: TC
Location: 594591 - 595262 (+)
Gene ID: Rep_739_c_15_512
Type: pfam
Location: 595320 - 597218 (+)
Gene ID: Rep_739_c_15_513
Type: CAZyme
Location: 597321 - 599321 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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