Cluster: Rep_739_CGC37
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_739
- CGC Family ID: CGCFAM_09007
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_739_c_14 | Rep_739_c_14_504 | 562963 | 563877 | + | 9.A.8.1.6 |
| TC | Rep_739_c_14 | Rep_739_c_14_505 | 563901 | 565094 | + | 9.A.8.1.6 |
| CAZyme | Rep_739_c_14 | Rep_739_c_14_506 | 565304 | 567919 | - | GH38 |
| CAZyme | Rep_739_c_14 | Rep_739_c_14_507 | 567930 | 569660 | - | GH5 |
| sulfatase | Rep_739_c_14 | Rep_739_c_14_508 | 569697 | 570431 | - | S1_20 |
| CAZyme | Rep_739_c_14 | Rep_739_c_14_509 | 570815 | 572581 | - | GH5 |
| NULL(UNKNOWN) | Rep_739_c_14 | Rep_739_c_14_510 | 572606 | 573361 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_739_c_14 | Rep_739_c_14_511 | 573358 | 574449 | - | LacI |
| TC | Rep_739_c_14 | Rep_739_c_14_512 | 574654 | 575949 | - | 9.B.126.2.2 |
| peptidase | Rep_739_c_14 | Rep_739_c_14_513 | 576023 | 577336 | - | M20.UNW |
| TC | Rep_739_c_14 | Rep_739_c_14_514 | 577721 | 580372 | + | 1.B.42.1.9 |
| pfam | Rep_739_c_14 | Rep_739_c_14_515 | 580420 | 582150 | + | tRNA-synt_2b | HGTP_anticodon | tRNA_edit |
| CAZyme | Rep_739_c_14 | Rep_739_c_14_516 | 582213 | 583484 | + | GH29 |
Gene ID: Rep_739_c_14_504
Type: TC
Location: 562963 - 563877 (+)
Type: TC
Location: 562963 - 563877 (+)
Gene ID: Rep_739_c_14_505
Type: TC
Location: 563901 - 565094 (+)
Type: TC
Location: 563901 - 565094 (+)
Gene ID: Rep_739_c_14_506
Type: CAZyme
Location: 565304 - 567919 (-)
Type: CAZyme
Location: 565304 - 567919 (-)
Gene ID: Rep_739_c_14_507
Type: CAZyme
Location: 567930 - 569660 (-)
Type: CAZyme
Location: 567930 - 569660 (-)
Gene ID: Rep_739_c_14_508
Type: sulfatase
Location: 569697 - 570431 (-)
Type: sulfatase
Location: 569697 - 570431 (-)
Gene ID: Rep_739_c_14_509
Type: CAZyme
Location: 570815 - 572581 (-)
Type: CAZyme
Location: 570815 - 572581 (-)
Gene ID: Rep_739_c_14_510
Type:
Location: 572606 - 573361 (-)
Type:
Location: 572606 - 573361 (-)
Gene ID: Rep_739_c_14_511
Type: TF
Location: 573358 - 574449 (-)
Type: TF
Location: 573358 - 574449 (-)
Gene ID: Rep_739_c_14_512
Type: TC
Location: 574654 - 575949 (-)
Type: TC
Location: 574654 - 575949 (-)
Gene ID: Rep_739_c_14_513
Type: peptidase
Location: 576023 - 577336 (-)
Type: peptidase
Location: 576023 - 577336 (-)
Gene ID: Rep_739_c_14_514
Type: TC
Location: 577721 - 580372 (+)
Type: TC
Location: 577721 - 580372 (+)
Gene ID: Rep_739_c_14_515
Type: pfam
Location: 580420 - 582150 (+)
Type: pfam
Location: 580420 - 582150 (+)
Gene ID: Rep_739_c_14_516
Type: CAZyme
Location: 582213 - 583484 (+)
Type: CAZyme
Location: 582213 - 583484 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
UBA1829
Genus
UBA1829
Species
UBA1829 sp905197955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.