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Cluster: Rep_739_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_739_c_0 Rep_739_c_0_92 111057 112163 - GT9
NULL(UNKNOWN) Rep_739_c_0 Rep_739_c_0_93 112242 112403 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_739_c_0 Rep_739_c_0_94 112451 112912 - PTS_EIIA_2
CAZyme Rep_739_c_0 Rep_739_c_0_95 113258 114496 + CE15
TC Rep_739_c_0 Rep_739_c_0_96 114544 116088 - 2.A.38.1.5
TC Rep_739_c_0 Rep_739_c_0_97 116097 117452 - 2.A.38.1.1
STP Rep_739_c_0 Rep_739_c_0_98 117468 117743 - PTS-HPr
TC Rep_739_c_0 Rep_739_c_0_99 117962 119128 + 2.A.4.7.4
NULL(UNKNOWN) Rep_739_c_0 Rep_739_c_0_100 119263 120351 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_739_c_0 Rep_739_c_0_101 120365 121825 - 3.A.11.1.3
Gene ID: Rep_739_c_0_92
Type: CAZyme
Location: 111057 - 112163 (-)
Gene ID: Rep_739_c_0_93
Type:
Location: 112242 - 112403 (+)
Gene ID: Rep_739_c_0_94
Type: pfam
Location: 112451 - 112912 (-)
Gene ID: Rep_739_c_0_95
Type: CAZyme
Location: 113258 - 114496 (+)
Gene ID: Rep_739_c_0_96
Type: TC
Location: 114544 - 116088 (-)
Gene ID: Rep_739_c_0_97
Type: TC
Location: 116097 - 117452 (-)
Gene ID: Rep_739_c_0_98
Type: STP
Location: 117468 - 117743 (-)
Gene ID: Rep_739_c_0_99
Type: TC
Location: 117962 - 119128 (+)
Gene ID: Rep_739_c_0_100
Type:
Location: 119263 - 120351 (-)
Gene ID: Rep_739_c_0_101
Type: TC
Location: 120365 - 121825 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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