Cluster: Rep_739_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_739
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_739_c_12 | Rep_739_c_12_74 | 90019 | 91938 | - | GH5_19 |
| TF | Rep_739_c_12 | Rep_739_c_12_75 | 92019 | 92999 | + | LacI |
| pfam | Rep_739_c_12 | Rep_739_c_12_76 | 93048 | 93902 | - | PPK2 |
| TC | Rep_739_c_12 | Rep_739_c_12_77 | 94319 | 96910 | + | 3.A.1.1.4 |
| TC | Rep_739_c_12 | Rep_739_c_12_78 | 96934 | 99084 | + | 3.A.1.1.26 |
Gene ID: Rep_739_c_12_74
Type: CAZyme
Location: 90019 - 91938 (-)
Type: CAZyme
Location: 90019 - 91938 (-)
Gene ID: Rep_739_c_12_75
Type: TF
Location: 92019 - 92999 (+)
Type: TF
Location: 92019 - 92999 (+)
Gene ID: Rep_739_c_12_76
Type: pfam
Location: 93048 - 93902 (-)
Type: pfam
Location: 93048 - 93902 (-)
Gene ID: Rep_739_c_12_77
Type: TC
Location: 94319 - 96910 (+)
Type: TC
Location: 94319 - 96910 (+)
Gene ID: Rep_739_c_12_78
Type: TC
Location: 96934 - 99084 (+)
Type: TC
Location: 96934 - 99084 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
UBA1829
Genus
UBA1829
Species
UBA1829 sp905197955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.