Cluster: Rep_729_CGC44
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_729
- CGC Family ID: CGCFAM_03862
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_729_c_59 | Rep_729_c_59_9 | 6544 | 8127 | - | 2.A.22.5.3 |
| pfam | Rep_729_c_59 | Rep_729_c_59_10 | 8270 | 8671 | + | 4HBT |
| CAZyme | Rep_729_c_59 | Rep_729_c_59_11 | 8721 | 9512 | - | CE4 |
| pfam | Rep_729_c_59 | Rep_729_c_59_12 | 9682 | 10512 | + | Kdo |
| NULL(UNKNOWN) | Rep_729_c_59 | Rep_729_c_59_13 | 10783 | 12432 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_729_c_59 | Rep_729_c_59_14 | 12577 | 14184 | + | 3.A.1.121.4 |
Gene ID: Rep_729_c_59_9
Type: TC
Location: 6544 - 8127 (-)
Type: TC
Location: 6544 - 8127 (-)
Gene ID: Rep_729_c_59_10
Type: pfam
Location: 8270 - 8671 (+)
Type: pfam
Location: 8270 - 8671 (+)
Gene ID: Rep_729_c_59_11
Type: CAZyme
Location: 8721 - 9512 (-)
Type: CAZyme
Location: 8721 - 9512 (-)
Gene ID: Rep_729_c_59_12
Type: pfam
Location: 9682 - 10512 (+)
Type: pfam
Location: 9682 - 10512 (+)
Gene ID: Rep_729_c_59_13
Type:
Location: 10783 - 12432 (+)
Type:
Location: 10783 - 12432 (+)
Gene ID: Rep_729_c_59_14
Type: TC
Location: 12577 - 14184 (+)
Type: TC
Location: 12577 - 14184 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
Victivallaceae
Genus
Victivallis
Species
Victivallis sp944391105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.