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Cluster: Rep_729_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_729_c_42 Rep_729_c_42_10 14460 16394 + GH39
CAZyme Rep_729_c_42 Rep_729_c_42_11 16408 17478 + GH130_4
TF Rep_729_c_42 Rep_729_c_42_12 17650 18231 + GntR
pfam Rep_729_c_42 Rep_729_c_42_13 18284 19084 + N_methyl
CAZyme Rep_729_c_42 Rep_729_c_42_14 19104 22361 + GH156
TC Rep_729_c_42 Rep_729_c_42_15 22361 23914 + 2.A.21.3.21
CAZyme Rep_729_c_42 Rep_729_c_42_16 23920 25566 + GH36
Gene ID: Rep_729_c_42_10
Type: CAZyme
Location: 14460 - 16394 (+)
Gene ID: Rep_729_c_42_11
Type: CAZyme
Location: 16408 - 17478 (+)
Gene ID: Rep_729_c_42_12
Type: TF
Location: 17650 - 18231 (+)
Gene ID: Rep_729_c_42_13
Type: pfam
Location: 18284 - 19084 (+)
Gene ID: Rep_729_c_42_14
Type: CAZyme
Location: 19104 - 22361 (+)
Gene ID: Rep_729_c_42_15
Type: TC
Location: 22361 - 23914 (+)
Gene ID: Rep_729_c_42_16
Type: CAZyme
Location: 23920 - 25566 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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