dbCAN Logo

Cluster: Rep_729_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_729_c_0 Rep_729_c_0_66 67210 69648 + CBM85 | GH10
NULL(UNKNOWN) Rep_729_c_0 Rep_729_c_0_67 69741 70331 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_729_c_0 Rep_729_c_0_68 70343 71245 + Rotamase_2
CAZyme Rep_729_c_0 Rep_729_c_0_69 71255 73009 + GH35
TF Rep_729_c_0 Rep_729_c_0_70 72984 73868 - HTH_AraC
CAZyme Rep_729_c_0 Rep_729_c_0_71 73993 75627 + GH78
pfam Rep_729_c_0 Rep_729_c_0_72 75638 76654 - GTP1_OBG | MMR_HSR1 | FeoB_N
pfam Rep_729_c_0 Rep_729_c_0_73 76761 77012 - Ribosomal_L27
TC Rep_729_c_0 Rep_729_c_0_74 77206 78951 + 3.A.1.106.2
Gene ID: Rep_729_c_0_66
Type: CAZyme
Location: 67210 - 69648 (+)
Gene ID: Rep_729_c_0_67
Type:
Location: 69741 - 70331 (+)
Gene ID: Rep_729_c_0_68
Type: pfam
Location: 70343 - 71245 (+)
Gene ID: Rep_729_c_0_69
Type: CAZyme
Location: 71255 - 73009 (+)
Gene ID: Rep_729_c_0_70
Type: TF
Location: 72984 - 73868 (-)
Gene ID: Rep_729_c_0_71
Type: CAZyme
Location: 73993 - 75627 (+)
Gene ID: Rep_729_c_0_72
Type: pfam
Location: 75638 - 76654 (-)
Gene ID: Rep_729_c_0_73
Type: pfam
Location: 76761 - 77012 (-)
Gene ID: Rep_729_c_0_74
Type: TC
Location: 77206 - 78951 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List