Cluster: Rep_729_CGC28
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_729
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_729_c_29 | Rep_729_c_29_2 | 796 | 2499 | + | GH87 |
| CAZyme | Rep_729_c_29 | Rep_729_c_29_3 | 2508 | 4565 | + | GH65 |
| pfam | Rep_729_c_29 | Rep_729_c_29_4 | 4565 | 7180 | + | Glyco_hydro_99 |
| CAZyme | Rep_729_c_29 | Rep_729_c_29_5 | 7234 | 10098 | - | GH39 |
| NULL(UNKNOWN) | Rep_729_c_29 | Rep_729_c_29_6 | 10187 | 10915 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_729_c_29 | Rep_729_c_29_7 | 11029 | 12114 | - | GntR |
| TC | Rep_729_c_29 | Rep_729_c_29_8 | 12258 | 12680 | - | 2.A.7.2.1 |
Gene ID: Rep_729_c_29_2
Type: CAZyme
Location: 796 - 2499 (+)
Type: CAZyme
Location: 796 - 2499 (+)
Gene ID: Rep_729_c_29_3
Type: CAZyme
Location: 2508 - 4565 (+)
Type: CAZyme
Location: 2508 - 4565 (+)
Gene ID: Rep_729_c_29_4
Type: pfam
Location: 4565 - 7180 (+)
Type: pfam
Location: 4565 - 7180 (+)
Gene ID: Rep_729_c_29_5
Type: CAZyme
Location: 7234 - 10098 (-)
Type: CAZyme
Location: 7234 - 10098 (-)
Gene ID: Rep_729_c_29_6
Type:
Location: 10187 - 10915 (-)
Type:
Location: 10187 - 10915 (-)
Gene ID: Rep_729_c_29_7
Type: TF
Location: 11029 - 12114 (-)
Type: TF
Location: 11029 - 12114 (-)
Gene ID: Rep_729_c_29_8
Type: TC
Location: 12258 - 12680 (-)
Type: TC
Location: 12258 - 12680 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
Victivallaceae
Genus
Victivallis
Species
Victivallis sp944391105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.